Evolutionary Bioenergetics Lab

Publications

Selected publications organized around current lab research themes.

Publications

Selected publications by research theme

This page emphasizes representative work connected to the lab’s current research directions. The full, automatically updated record is best maintained through Google Scholar.

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AOX evolution and physiology

2026Horizontally acquired mitochondrial alternative oxidase contributes to springtail bioenergetics and life belowground
Weaver, Ryan J. bioRxiv, 2026.06. 01.729305.

2026Functional integration of horizontally transferred mitochondrial alternative oxidase in springtails
Weaver, Ryan. INTEGRATIVE AND COMPARATIVE BIOLOGY, 66.0 305-305.

2023Mitochondrial alternative oxidase across the tree of life: Presence, absence, and putative cases of lateral gene transfer
Weaver, Ryan J; Mcdonald, Allison E. Biochimica et Biophysica Acta (BBA)-Bioenergetics, 1864.0 (4.0) 149003.

2019Hypothesized evolutionary consequences of the alternative oxidase (AOX) in animal mitochondria
Weaver, Ryan J. Integrative and Comparative Biology, 59.0 (4.0) 994-1004.

Fungal pathogen bioenergetics

2024A call for studying mitochondrial bioenergetics of animal-infecting fungi
Weaver, Ryan. INTEGRATIVE AND COMPARATIVE BIOLOGY, 64.0 S545-S545.

Pollinator bioenergetics

2026Muscles, mitochondria, and bioenergetics of division of labor in bumblebees
Orr, Quinton; Toth, Amy; Weaver, Ryan. INTEGRATIVE AND COMPARATIVE BIOLOGY, 66.0 215-215.

Mitonuclear coevolution

2022Genomic signatures of mitonuclear coevolution in mammals
Weaver, Ryan J; Rabinowitz, Samantha; Thueson, Kiley; Havird, Justin C. Molecular biology and evolution, 39.0 (11.0) msac233.

2023Disentangling positive selection from relaxed selection in animal mitochondrial genomes
Zwonitzer, Kendra D; Iverson, Erik NK; Sterling, Jess E; Weaver, Ryan J; Maclaine, Bradley A; Havird, Justin C. The American Naturalist, 202.0 (4.0) E121-E129.

2020High mitochondrial mutation rates in Silene are associated with nuclear-mediated changes in mitochondrial physiology
Weaver, Ryan J; Carrion, Gina; Nix, Rachel; Maeda, Gerald P; Rabinowitz, Samantha; Iverson, Erik NK; Thueson, Kiley; Havird, Justin C. Biology Letters, 16.0 (9.0) 20200450.

2019Beyond the powerhouse: integrating mitonuclear evolution, physiology, and theory in comparative biology
Havird, Justin C; Weaver, Ryan J; Milani, Liliana; Ghiselli, Fabrizio; Greenway, Ryan; Ramsey, Adam J; Jimenez, Ana G; Dowling, Damian K; Hood, Wendy R; Montooth, Kristi L. Integrative and Comparative Biology, 59.0 (4.0) 856-863.

Honest signaling, sexual selection, and carotenoids

2026Shared Pathways, Physiological Constraint, and the Evolutionary Origins of an Honest Signal. A commentary on Számadó et al.(2025)
Hill, Geoffrey E; Powers, Matthew J; Weaver, Ryan J. Journal of Evolutionary Biology, voag048.

2023Carotenoid ornaments and the spandrels of physiology: a critique of theory to explain condition dependency
Hill, Geoffrey E; Weaver, Ryan J; Powers, Matthew J. Biological Reviews, 98.0 (6.0) 2320-2332.

2023Color displays produced by metabolized red carotenoids are inherently honest signals
Hill, Geoffrey; Powers, Matthew; Weaver, Ryan. INTEGRATIVE AND COMPARATIVE BIOLOGY, 63.0 S202-S202.

2018Carotenoid metabolism strengthens the link between feather coloration and individual quality
Weaver, Ryan J; Santos, Eduardo SA; Tucker, Anna M; Wilson, Alan E; Hill, Geoffrey E. Nature Communications, 9.0 (1.0) 73.

2017What maintains signal honesty in animal colour displays used in mate choice?
Weaver, Ryan J.; Koch, Rebecca E.; Hill, Geoffrey E. Philosophical Transactions of the Royal Society B, 372.0 20160343.